Works in Latin:
* Annotationes in Valerium Flaccum (1522): An edition of the Latin poet Valerius Flaccus, with commentary.
* Annotationes in Silium Italicum (1527): An edition of the Latin poet Silius Italicus, with commentary.
* Annotationes in Lucanum (1528): An edition of the Latin poet Lucan, with commentary.
* Annotationes in Claudianum (1532): An edition of the Latin poet Claudian, with commentary.
* Annotationes in Statium (1535): An edition of the Latin poet Statius, with commentary.
* Annotationes in Propertium (1538): An edition of the Latin poet Propertius, with commentary.
* Annotationes in Tibullum (1538): An edition of the Latin poet Tibullus, with commentary.
* Annotationes in Ovidium (1541): An edition of the Latin poet Ovid, with commentary.
* Annotationes in Quintilium (1541): An edition of the Latin rhetorician Quintilian, with commentary.
* De Historia Romana (1532): A work on Roman history.
* De Legibus Romanorum (1533): A work on Roman law.
* De Bello Gallico (1534): A commentary on Caesar's "De Bello Gallico".
* De Bello Hispaniensi (1535): A work on the Roman conquest of Spain.
* De Bello Macedonico (1536): A work on the Roman conquest of Macedonia.
* De Bello Africano (1537): A work on the Roman conquest of Africa.
* De Bello Mithridatico (1538): A work on the Roman war against Mithridates VI of Pontus.
* De Bello Germanico (1539): A work on the Roman conquest of Germany.
* De Bello Dacico (1540): A work on the Roman war against the Dacians.
Other works:
* Epistolae (1542): A collection of letters.
* Orationes (1542): A collection of speeches.
* Poemata (1542): A collection of poems.
Budelius was a major figure in the humanist movement, and his works helped to revive interest in classical literature. His editions of Latin authors were widely used in schools and universities, and his commentaries were influential in shaping the understanding of these authors.